# {py:mod}`ovo.cli.init`

```{py:module} ovo.cli.init
```

```{autodoc2-docstring} ovo.cli.init
:allowtitles:
```

## Module Contents

### Functions

````{list-table}
:class: autosummary longtable
:align: left

* - {py:obj}`home <ovo.cli.init.home>`
  - ```{autodoc2-docstring} ovo.cli.init.home
    :summary:
    ```
* - {py:obj}`preview <ovo.cli.init.preview>`
  - ```{autodoc2-docstring} ovo.cli.init.preview
    :summary:
    ```
* - {py:obj}`rfdiffusion <ovo.cli.init.rfdiffusion>`
  - ```{autodoc2-docstring} ovo.cli.init.rfdiffusion
    :summary:
    ```
* - {py:obj}`proteinqc <ovo.cli.init.proteinqc>`
  - ```{autodoc2-docstring} ovo.cli.init.proteinqc
    :summary:
    ```
````

### Data

````{list-table}
:class: autosummary longtable
:align: left

* - {py:obj}`app <ovo.cli.init.app>`
  - ```{autodoc2-docstring} ovo.cli.init.app
    :summary:
    ```
* - {py:obj}`RFDIFFUSION_MODEL_FILES <ovo.cli.init.RFDIFFUSION_MODEL_FILES>`
  - ```{autodoc2-docstring} ovo.cli.init.RFDIFFUSION_MODEL_FILES
    :summary:
    ```
* - {py:obj}`ALPHAFOLD_MODEL_FILES <ovo.cli.init.ALPHAFOLD_MODEL_FILES>`
  - ```{autodoc2-docstring} ovo.cli.init.ALPHAFOLD_MODEL_FILES
    :summary:
    ```
* - {py:obj}`ESM1V_MODEL_FILES <ovo.cli.init.ESM1V_MODEL_FILES>`
  - ```{autodoc2-docstring} ovo.cli.init.ESM1V_MODEL_FILES
    :summary:
    ```
* - {py:obj}`ESM_IF_MODEL_FILES <ovo.cli.init.ESM_IF_MODEL_FILES>`
  - ```{autodoc2-docstring} ovo.cli.init.ESM_IF_MODEL_FILES
    :summary:
    ```
* - {py:obj}`BOLTZ_MODEL_FILES <ovo.cli.init.BOLTZ_MODEL_FILES>`
  - ```{autodoc2-docstring} ovo.cli.init.BOLTZ_MODEL_FILES
    :summary:
    ```
````

### API

````{py:data} app
:canonical: ovo.cli.init.app
:value: >
   'Typer(...)'

```{autodoc2-docstring} ovo.cli.init.app
```

````

````{py:data} RFDIFFUSION_MODEL_FILES
:canonical: ovo.cli.init.RFDIFFUSION_MODEL_FILES
:value: >
   [('https://files.ipd.uw.edu/pub/RFdiffusion/6f5902ac237024bdd0c176cb93063dc4/Base_ckpt.pt', 'rfdiffu...

```{autodoc2-docstring} ovo.cli.init.RFDIFFUSION_MODEL_FILES
```

````

````{py:data} ALPHAFOLD_MODEL_FILES
:canonical: ovo.cli.init.ALPHAFOLD_MODEL_FILES
:value: >
   [('https://storage.googleapis.com/alphafold/alphafold_params_2022-12-06.tar', 'alphafold_models', '3...

```{autodoc2-docstring} ovo.cli.init.ALPHAFOLD_MODEL_FILES
```

````

````{py:data} ESM1V_MODEL_FILES
:canonical: ovo.cli.init.ESM1V_MODEL_FILES
:value: >
   [('https://dl.fbaipublicfiles.com/fair-esm/models/esm1v_t33_650M_UR90S_1.pt', 'esm_models/esm1v_t33_...

```{autodoc2-docstring} ovo.cli.init.ESM1V_MODEL_FILES
```

````

````{py:data} ESM_IF_MODEL_FILES
:canonical: ovo.cli.init.ESM_IF_MODEL_FILES
:value: >
   [('https://dl.fbaipublicfiles.com/fair-esm/models/esm_if1_gvp4_t16_142M_UR50.pt', 'esm_models/esm_if...

```{autodoc2-docstring} ovo.cli.init.ESM_IF_MODEL_FILES
```

````

````{py:data} BOLTZ_MODEL_FILES
:canonical: ovo.cli.init.BOLTZ_MODEL_FILES
:value: >
   None

```{autodoc2-docstring} ovo.cli.init.BOLTZ_MODEL_FILES
```

````

````{py:function} home(home_dir: str | None = typer.Argument(None, help='OVO home directory'), yes: bool = typer.Option(False, '--yes', '-y', help='Confirm all without prompting'), no_env: bool = typer.Option(False, '--no-env', help='Do not set OVO_HOME in shell .bashrc/.zshrc file'), default_profile: str = typer.Option(None, '--profile', help='Default nextflow profile to use in default scheduler'))
:canonical: ovo.cli.init.home

```{autodoc2-docstring} ovo.cli.init.home
```
````

````{py:function} preview()
:canonical: ovo.cli.init.preview

```{autodoc2-docstring} ovo.cli.init.preview
```
````

````{py:function} rfdiffusion(scheduler: str = None)
:canonical: ovo.cli.init.rfdiffusion

```{autodoc2-docstring} ovo.cli.init.rfdiffusion
```
````

````{py:function} proteinqc(tool_keys: str = typer.Option('all', '--tools', help="Comma-separated list of ProteinQC tools to use, or 'all' to use all available tools (supported by the scheduler)"), scheduler: str = None)
:canonical: ovo.cli.init.proteinqc

```{autodoc2-docstring} ovo.cli.init.proteinqc
```
````