ovo.app.components.input_components

Module Contents

Functions

initialize_workflow

Initialize a workflow in the session state based on dropdown with available workflow variants (subclasses).

pdb_input_component

sequence_selection_fragment

Fragment to display input structure and allow residue selection via molstar component.

API

ovo.app.components.input_components.initialize_workflow(page_key: str, workflow_name: str, include_subclasses: bool = False) → ovo.core.database.Workflow

Initialize a workflow in the session state based on dropdown with available workflow variants (subclasses).

Parameters:

  • page_key – Key identifying the workflow page, used as key in session_state.workflows

  • workflow_name – Base name of the workflow (e.g. “rfdiffusion-end-to-end”)

  • include_subclasses – Whether to let user choose from subclasses of the base workflow as variants

ovo.app.components.input_components.pdb_input_component(old_pdb_code: str | None) → tuple[str, bytes] | None
ovo.app.components.input_components.sequence_selection_fragment(page_key: str, input_name: str, color='chain-id', representation_type='cartoon+ball-and-stick', write_segments: bool = True, fixed_segments: list[ovo.app.components.molstar_custom_component.dataclasses.ContigSegment] | None = None, **selection_kwargs)

Fragment to display input structure and allow residue selection via molstar component.

Parameters:

  • page_key – Key identifying the workflow page, typically file

  • input_name – Name of the input structure, used for download filename

  • color – Initial color scheme for molstar component

  • representation_type – Initial representation type for molstar component

  • write_segments – Whether to write selected segments (True) or individual residues (False)

  • fixed_segments – If provided, only these segments will be shown in the structure (others hidden)

  • selection_kwargs – Additional kwargs passed to workflow.get/set_selected_segments methods