`ovo.core.database.descriptors_proteinqc`¶

Module Contents¶

Data¶

`LENGTH`
`A_PERC`
`C_PERC`
`D_PERC`
`E_PERC`
`F_PERC`
`G_PERC`
`H_PERC`
`I_PERC`
`K_PERC`
`L_PERC`
`M_PERC`
`N_PERC`
`P_PERC`
`Q_PERC`
`R_PERC`
`S_PERC`
`T_PERC`
`V_PERC`
`W_PERC`
`Y_PERC`
`NONPOLAR_PERC`
`POLAR_UNCHARGED_PERC`
`POSITIVE_PERC`
`NEGATIVE_PERC`
`TURN_FORMING_PERC`
`AROMATIC_PERC`
`DENQ_PERC`
`AROMATICITY`
`CHARGE_5_5`
`CHARGE_7_4`
`ISOELECTRIC_POINT`
`MEC_REDUCED`
`MEC_CYSTINES`
`HELIX_SEQ_PERC`
`SHEET_SEQ_PERC`
`TURN_SEQ_PERC`
`FLEXIBILITY_AVG`
`GRAVY`
`INSTABILITY_INDEX`
`MOLECULEAR_WEIGHT`
`ENTROPY`
`ESM1V`
`ESMIF`
`ESM_IF_NATIVE_SEQ_AVG_LOGITS`
`ESM_IF_NATIVE_SEQ_SUM_LOGITS`
`PERC_SOLUBILITY`
`SOLUBILITY`
`AVG_CHARGE`
`AVG_CHARGE_NEGATIVE`
`AVG_CHARGE_POSITIVE`
`PERC_NEGATIVE`
`PERC_POSITIVE`
`HELIX_PERCENTAGE`
`SHEET_PERCENTAGE`
`TURN_PERCENTAGE`
`ISOLATED_BETA_BRIDGE_PERCENTAGE`
`HELIX_3_10_PERCENTAGE`
`PI_HELIX_PERCENTAGE`
`BEND_PERCENTAGE`
`NONE_PERCENTAGE`
`ASPHERICITY`
`SHAPE_PARAMETER`
`RADIUS_OF_GYRATION_ALL_ATOM`
`RADIUS_OF_GYRATION_NORM`
`RAMACHANDRAN_ALLOWED_PERCENTAGE`
`RAMACHANDRAN_MARGINALLY_ALLOWED_PERCENTAGE`
`RAMACHANDRAN_OUTLIERS_PERCENTAGE`
`HYDROPHOBIC_TOTAL_AREA`
`HYDROPHOBIC_TOTAL_AREA_NORM`
`HYDROPHOBIC_TOP_PATCH_AREA`
`HYDROPHOBIC_TOP_PATCH_AREA_NORM`
`HYDROPHOBIC_SAP_SCORE`
`HYDROPHOBIC_SASA`
`HYDROPHOBIC_SURFACE_INTEGRAL`
`CHARGED_POSITIVE_5_5_TOTAL_AREA`
`CHARGED_POSITIVE_5_5_TOTAL_AREA_NORM`
`CHARGED_POSITIVE_5_5_TOP_PATCH_AREA`
`CHARGED_POSITIVE_5_5_TOP_PATCH_AREA_NORM`
`CHARGED_NEGATIVE_5_5_TOTAL_AREA`
`CHARGED_NEGATIVE_5_5_TOTAL_AREA_NORM`
`CHARGED_NEGATIVE_5_5_TOP_PATCH_AREA`
`CHARGED_NEGATIVE_5_5_TOP_PATCH_AREA_NORM`
`CHARGED_INTEGRAL_5_5`
`CHARGED_INTEGRAL_HIGH_5_5`
`CHARGED_INTEGRAL_LOW_5_5`
`CHARGED_INTEGRAL_POSITIVE_5_5`
`CHARGED_INTEGRAL_NEGATIVE_5_5`
`CHARGED_POSITIVE_7_4_TOTAL_AREA`
`CHARGED_POSITIVE_7_4_TOTAL_AREA_NORM`
`CHARGED_POSITIVE_7_4_TOP_PATCH_AREA`
`CHARGED_POSITIVE_7_4_TOP_PATCH_AREA_NORM`
`CHARGED_NEGATIVE_7_4_TOTAL_AREA`
`CHARGED_NEGATIVE_7_4_TOTAL_AREA_NORM`
`CHARGED_NEGATIVE_7_4_TOP_PATCH_AREA`
`CHARGED_NEGATIVE_7_4_TOP_PATCH_AREA_NORM`
`CHARGED_INTEGRAL_7_4`
`CHARGED_INTEGRAL_HIGH_7_4`
`CHARGED_INTEGRAL_LOW_7_4`
`CHARGED_INTEGRAL_POSITIVE_7_4`
`CHARGED_INTEGRAL_NEGATIVE_7_4`
`PROTEINQC_SEQUENCE_DESCRIPTORS`
`PROTEINQC_STRUCTURE_DESCRIPTORS`
`SEQ_COMPOSITION_DESCRIPTORS`
`ESM_DESCRIPTORS`
`PROTEIN_SOL_DESCRIPTORS`
`DSSP_DESCRIPTORS`
`SHAPE_DESCRIPTORS`
`PEP_PATCH_HYDROPHOBICITY_DESCRIPTORS`
`PEP_PATCH_HYDROPHOBICITY_DESCRIPTORS_BY_KEY`
`PEP_PATCH_CHARGE_DESCRIPTORS`
`PEP_PATCH_CHARGE_DESCRIPTORS_BY_KEY`
`PEP_PATCH_DESCRIPTORS`
`DESCRIPTORS`
`PROTEINQC_MAIN_DESCRIPTORS`
`PRESETS`

API¶

ovo.core.database.descriptors_proteinqc.LENGTH¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.A_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.C_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.D_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.E_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.F_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.G_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.H_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.I_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.K_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.L_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.M_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.N_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.P_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.Q_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.R_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.S_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.T_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.V_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.W_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.Y_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.NONPOLAR_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.POLAR_UNCHARGED_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.POSITIVE_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.NEGATIVE_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.TURN_FORMING_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.AROMATIC_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.DENQ_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.AROMATICITY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGE_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGE_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ISOELECTRIC_POINT¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.MEC_REDUCED¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.MEC_CYSTINES¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HELIX_SEQ_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.SHEET_SEQ_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.TURN_SEQ_PERC¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.FLEXIBILITY_AVG¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.GRAVY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.INSTABILITY_INDEX¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.MOLECULEAR_WEIGHT¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ENTROPY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ESM1V¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ESMIF¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ESM_IF_NATIVE_SEQ_AVG_LOGITS¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ESM_IF_NATIVE_SEQ_SUM_LOGITS¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.PERC_SOLUBILITY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.SOLUBILITY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.AVG_CHARGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.AVG_CHARGE_NEGATIVE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.AVG_CHARGE_POSITIVE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.PERC_NEGATIVE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.PERC_POSITIVE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HELIX_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.SHEET_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.TURN_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ISOLATED_BETA_BRIDGE_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HELIX_3_10_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.PI_HELIX_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.BEND_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.NONE_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.ASPHERICITY¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.SHAPE_PARAMETER¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.RADIUS_OF_GYRATION_ALL_ATOM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.RADIUS_OF_GYRATION_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.RAMACHANDRAN_ALLOWED_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.RAMACHANDRAN_MARGINALLY_ALLOWED_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.RAMACHANDRAN_OUTLIERS_PERCENTAGE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_TOTAL_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_TOTAL_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_TOP_PATCH_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_TOP_PATCH_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_SAP_SCORE¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_SASA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.HYDROPHOBIC_SURFACE_INTEGRAL¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_5_5_TOTAL_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_5_5_TOTAL_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_5_5_TOP_PATCH_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_5_5_TOP_PATCH_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_5_5_TOTAL_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_5_5_TOTAL_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_5_5_TOP_PATCH_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_5_5_TOP_PATCH_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_HIGH_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_LOW_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_POSITIVE_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_NEGATIVE_5_5¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_7_4_TOTAL_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_7_4_TOTAL_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_7_4_TOP_PATCH_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_POSITIVE_7_4_TOP_PATCH_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_7_4_TOTAL_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_7_4_TOTAL_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_7_4_TOP_PATCH_AREA¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_NEGATIVE_7_4_TOP_PATCH_AREA_NORM¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_HIGH_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_LOW_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_POSITIVE_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.CHARGED_INTEGRAL_NEGATIVE_7_4¶: ‘NumericGlobalDescriptor(…)’

ovo.core.database.descriptors_proteinqc.PROTEINQC_SEQUENCE_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PROTEINQC_STRUCTURE_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.SEQ_COMPOSITION_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.ESM_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PROTEIN_SOL_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.DSSP_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.SHAPE_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PEP_PATCH_HYDROPHOBICITY_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PEP_PATCH_HYDROPHOBICITY_DESCRIPTORS_BY_KEY¶: None

ovo.core.database.descriptors_proteinqc.PEP_PATCH_CHARGE_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PEP_PATCH_CHARGE_DESCRIPTORS_BY_KEY¶: None

ovo.core.database.descriptors_proteinqc.PEP_PATCH_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PROTEINQC_MAIN_DESCRIPTORS¶: None

ovo.core.database.descriptors_proteinqc.PRESETS¶: None

ovo.core.database.descriptors_proteinqc¶

Module Contents¶

Data¶

API¶

`ovo.core.database.descriptors_proteinqc`¶