ovo.app.components.workflow_visualization_components¶
Module Contents¶
Functions¶
Visualize alignment between input and designed sequences based on contig segments. |
API¶
- ovo.app.components.workflow_visualization_components.show_design_metrics(design_id: str, descriptor_keys: list[str])¶
- ovo.app.components.workflow_visualization_components.select_structure_prediction_descriptor(paths: dict[str, str]) ovo.core.database.StructureFileDescriptor | None¶
- ovo.app.components.workflow_visualization_components.rfdiffusion_scaffold_design_visualization(design_id: str | None)¶
- ovo.app.components.workflow_visualization_components.rfdiffusion_multiple_binder_designs_visualization(all_design_ids: list[str], max_examples: int = 20)¶
- ovo.app.components.workflow_visualization_components.rfdiffusion_binder_design_visualization(design_id: str)¶
- ovo.app.components.workflow_visualization_components.bindcraft_binder_design_visualization(design_id: str)¶
- ovo.app.components.workflow_visualization_components.visualize_design_structure(design_id: str, height='500px')¶
- ovo.app.components.workflow_visualization_components.visualize_design_sequence(design_id: str)¶
- ovo.app.components.workflow_visualization_components.visualize_rfdiffusion_design_sequence(design_id: str)¶
- ovo.app.components.workflow_visualization_components.visualize_scaffold_alignment(input_seq_by_resno: dict[str, dict[str, str]], designed_sequences: dict[str, str], parsed_segments: list[ovo.app.components.molstar_custom_component.dataclasses.ContigSegment], inpainted_positions: list[str])¶
Visualize alignment between input and designed sequences based on contig segments.
- Parameters:
input_seq_by_resno – Mapping from chain ID -> residue number (as string) -> amino acid.
designed_sequences – Mapping from chain ID -> designed sequence.
parsed_segments – List of ContigSegment objects representing the contig segments.
inpainted_positions – List of positions (e.g., ‘A12’) that were inpainted.